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  5. HORVU4Hr1G025620.28

HORVU4Hr1G025620.28


Description : PHD finger transcription factor & component *(DDP) of ISWI chromatin remodeling complex


Gene families : OG_42_0001571 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001571_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G025620.28
Cluster HCAA Clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Sobic.008G033900.2 No alias component *(DDP) of ISWI chromatin remodeling complex &... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005795 Golgi stack IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0031647 regulation of protein stability IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0042301 phosphate ion binding IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050821 protein stabilization IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 615 657
IPR018501 DDT_dom 399 455
No external refs found!