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  5. HORVU4Hr1G028810.4

HORVU4Hr1G028810.4


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G028810.4
Cluster HCAA Clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G382557 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G075860.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
HORVU5Hr1G022590.1 No alias pectin methylesterase 0.06 Orthogroups_2024-Update
Pp1s446_3V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 79 375
No external refs found!