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  5. HORVU4Hr1G029060.1

HORVU4Hr1G029060.1


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G029060.1
Cluster HCAA Clusters: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
100621 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
At3g13770 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Orthogroups_2024-Update
At3g14730 No alias Pentatricopeptide repeat-containing protein At3g14730... 0.04 Orthogroups_2024-Update
At4g30700 No alias MEF29 [Source:UniProtKB/TrEMBL;Acc:A0A178UUW3] 0.04 Orthogroups_2024-Update
Bradi1g47170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Orthogroups_2024-Update
Bradi2g45250 No alias mitochondrial RNAediting factor 1 0.04 Orthogroups_2024-Update
Bradi3g29450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g37252 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g55520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.F03861.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H03086.1 No alias Unknown function 0.05 Orthogroups_2024-Update
GRMZM2G168170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G035600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Orthogroups_2024-Update
Pp1s26_188V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s48_253V6 No alias hypothetical protein [Oryza sativa (japonica cultivar-group)] 0.04 Orthogroups_2024-Update
Seita.1G205700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.1G215700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.2G373100.1 No alias RNA editing factor *(OTP90) 0.03 Orthogroups_2024-Update
Seita.3G244400.1 No alias RNA editing factor *(MEF32) 0.08 Orthogroups_2024-Update
Seita.4G046900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.5G302500.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.7G324400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G075300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G514800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.001G282300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G025100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G008400.2 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 980 1072
IPR002885 Pentatricopeptide_repeat 461 507
IPR002885 Pentatricopeptide_repeat 562 600
IPR002885 Pentatricopeptide_repeat 768 812
IPR002885 Pentatricopeptide_repeat 255 302
IPR002885 Pentatricopeptide_repeat 359 407
IPR002885 Pentatricopeptide_repeat 333 358
IPR002885 Pentatricopeptide_repeat 536 560
IPR002885 Pentatricopeptide_repeat 738 758
IPR002885 Pentatricopeptide_repeat 666 695
IPR002885 Pentatricopeptide_repeat 638 663
No external refs found!