Description : 40S ribosomal protein S17-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQZ1]
Gene families : OG_42_0002664 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002664_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At3g10610 | |
Cluster | HCCA clusters: Cluster_159 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
270936 | No alias | Ribosomal S17 family protein | 0.05 | Orthogroups_2024-Update | |
Bradi3g29060 | No alias | Ribosomal S17 family protein | 0.04 | Orthogroups_2024-Update | |
Brara.B00154.1 | No alias | component *(eS17) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.C00178.1 | No alias | component *(eS17) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
Brara.E03000.1 | No alias | component *(eS17) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Brara.J02711.1 | No alias | component *(eS17) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
Cre12.g498250 | No alias | Ribosomal S17 family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.07G219500 | No alias | Ribosomal S17 family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.20G017700 | No alias | Ribosomal S17 family protein | 0.04 | Orthogroups_2024-Update | |
HORVU1Hr1G042220.1 | No alias | component *(eS17) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Kfl00038_0080 | kfl00038_0080_v1.1 | (at5g04800 : 192.0) Ribosomal S17 family protein;... | 0.03 | Orthogroups_2024-Update | |
MA_184894g0010 | No alias | (at5g04800 : 212.0) Ribosomal S17 family protein;... | 0.03 | Orthogroups_2024-Update | |
Mp8g18950.1 | No alias | component RPS17 of SSU proteome | 0.03 | Orthogroups_2024-Update | |
PSME_00034734-RA | No alias | (at5g04800 : 198.0) Ribosomal S17 family protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.008G017300 | No alias | Ribosomal S17 family protein | 0.04 | Orthogroups_2024-Update | |
Pp1s76_75V6 | No alias | 40s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Seita.9G218400.1 | No alias | component *(eS17) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
Seita.9G497100.1 | No alias | component *(eS17) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Sobic.010G076400.1 | No alias | component *(eS17) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Solyc05g055230 | No alias | 40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC) | 0.06 | Orthogroups_2024-Update | |
Solyc11g006690 | No alias | 40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Sopen05g033670 | No alias | Ribosomal S17 | 0.05 | Orthogroups_2024-Update | |
Sopen10g032640 | No alias | Ribosomal S17 | 0.07 | Orthogroups_2024-Update | |
Sopen11g002620 | No alias | Ribosomal S17 | 0.08 | Orthogroups_2024-Update | |
evm.model.contig_2507.2 | No alias | (at2g05220 : 160.0) Ribosomal S17 family protein;... | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Predicted GO |
BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Predicted GO |
MF | GO:0003883 | CTP synthase activity | IEP | Predicted GO |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006275 | regulation of DNA replication | IEP | Predicted GO |
BP | GO:0006555 | methionine metabolic process | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008172 | S-methyltransferase activity | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009086 | methionine biosynthetic process | IEP | Predicted GO |
BP | GO:0009415 | response to water | IEP | Predicted GO |
BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Predicted GO |
MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042255 | ribosome assembly | IEP | Predicted GO |
BP | GO:0042256 | mature ribosome assembly | IEP | Predicted GO |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predicted GO |
MF | GO:0043022 | ribosome binding | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001210 | Ribosomal_S17e | 1 | 120 |
No external refs found! |