HORVU4Hr1G049670.2


Description : component *(eL19) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001643_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G049670.2
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
271656 No alias Ribosomal protein L19e family protein 0.08 Orthogroups_2024-Update
A4A49_58465 No alias 60s ribosomal protein l19-2 0.07 Orthogroups_2024-Update
Bradi1g17920 No alias Ribosomal protein L19e family protein 0.09 Orthogroups_2024-Update
Bradi1g63010 No alias Ribosomal protein L19e family protein 0.08 Orthogroups_2024-Update
Brara.I00133.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.I05560.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Brara.J00128.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Cre02.g075700 No alias Ribosomal protein L19e family protein 0.08 Orthogroups_2024-Update
GRMZM2G116135 No alias Ribosomal protein L19e family protein 0.04 Orthogroups_2024-Update
Glyma.02G016000 No alias Ribosomal protein L19e family protein 0.04 Orthogroups_2024-Update
Glyma.03G211000 No alias Ribosomal protein L19e family protein 0.04 Orthogroups_2024-Update
Glyma.03G216600 No alias Ribosomal protein L19e family protein 0.04 Orthogroups_2024-Update
Glyma.19G213200 No alias Ribosomal protein L19e family protein 0.03 Orthogroups_2024-Update
Kfl00915_0030 kfl00915_0030_v1.1 (at1g02780 : 290.0) embryo defective 2386 (emb2386);... 0.04 Orthogroups_2024-Update
MA_1839g0010 No alias (at1g02780 : 287.0) embryo defective 2386 (emb2386);... 0.04 Orthogroups_2024-Update
MA_22977g0010 No alias (at1g02780 : 282.0) embryo defective 2386 (emb2386);... 0.05 Orthogroups_2024-Update
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.05 Orthogroups_2024-Update
PSME_00044681-RA No alias (at3g16780 : 285.0) Ribosomal protein L19e family... 0.03 Orthogroups_2024-Update
Potri.012G037500 No alias Ribosomal protein L19e family protein 0.04 Orthogroups_2024-Update
Pp1s121_144V6 No alias 60s ribosomal protein 0.1 Orthogroups_2024-Update
Pp1s144_37V6 No alias ribosomal protein l19 0.09 Orthogroups_2024-Update
Pp1s235_118V6 No alias 60s ribosomal protein 0.07 Orthogroups_2024-Update
Pp1s302_25V6 No alias ribosomal protein l19 0.02 Orthogroups_2024-Update
Pp1s3_375V6 No alias 60s ribosomal protein l19-3 0.07 Orthogroups_2024-Update
Pp1s50_102V6 No alias 60s ribosomal protein l19-3 0.05 Orthogroups_2024-Update
Pp1s83_173V6 No alias 60s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s83_174V6 No alias 60s ribosomal protein 0.02 Orthogroups_2024-Update
Seita.4G043900.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.003G196800.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.004G045300.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Sobic.010G069400.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Solyc06g009210 No alias Ribosomal protein L19 (AHRD V3.3 *** K4C3V1_SOLLC) 0.04 Orthogroups_2024-Update
Solyc09g075430 No alias Ribosomal protein L19 (AHRD V3.3 *** K4CVC0_SOLLC) 0.07 Orthogroups_2024-Update
Sopen09g030210 No alias Ribosomal protein L19e 0.06 Orthogroups_2024-Update
evm.model.contig_735.3 No alias (at3g16780 : 205.0) Ribosomal protein L19e family... 0.07 Orthogroups_2024-Update
evm.model.tig00021181.1 No alias (at1g02780 : 206.0) embryo defective 2386 (emb2386);... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004017 adenylate kinase activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006177 GMP biosynthetic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009163 nucleoside biosynthetic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042451 purine nucleoside biosynthetic process IEP Predicted GO
BP GO:0042455 ribonucleoside biosynthetic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0046037 GMP metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901659 glycosyl compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 145
No external refs found!