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  5. HORVU4Hr1G051080.3

HORVU4Hr1G051080.3


Description : GARP subgroup PHL transcription factor & transcription factor *(PHR1)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G051080.3
Cluster HCAA Clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Bradi5g20520 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G701218 No alias myb-related protein 1 0.05 Orthogroups_2024-Update
Glyma.10G196600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G184700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Kfl00262_0120 kfl00262_0120_v1.... (at2g01060 : 94.0) myb-like HTH transcriptional... 0.02 Orthogroups_2024-Update
Potri.001G133400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G032700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s25_131V6 No alias F18A5.30; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.1G069400.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.04 Orthogroups_2024-Update
Seita.2G436900.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Seita.7G223500.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G386700.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G121600.1 No alias GARP subgroup PHL transcription factor & transcription... 0.05 Orthogroups_2024-Update
Sobic.006G202300.2 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Sobic.007G137300.2 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G178000.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G224200.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Solyc05g055940 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc06g051060 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.03 Orthogroups_2024-Update
Solyc08g076400 No alias Myb family transcription factor family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc10g085620 No alias Myb family transcription factor APL (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc11g011770 No alias Myb family transcription factor-like protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g006280 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.04 Orthogroups_2024-Update
Sopen10g035030 No alias MYB-CC type transfactor, LHEQLE motif 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 233 284
IPR025756 Myb_CC_LHEQLE 314 360
No external refs found!