1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU4Hr1G057450.1

HORVU4Hr1G057450.1


Description : component *(uL10) of organelle large ribosomal-subunit proteome & component *(uL10c) of large plastid ribosomal-subunit proteome


Gene families : OG_42_0003486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003486_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G057450.1
Cluster HCAA Clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
233811 No alias Ribosomal protein L10 family protein 0.07 Orthogroups_2024-Update
A4A49_00506 No alias 50s ribosomal protein l10, chloroplastic 0.03 Orthogroups_2024-Update
AC217300.3_FG005 No alias Ribosomal protein L10 family protein 0.03 Orthogroups_2024-Update
Brara.B00501.1 No alias component *(uL10) of organelle large ribosomal-subunit... 0.03 Orthogroups_2024-Update
Cre06.g272850 No alias Ribosomal protein L10 family protein 0.03 Orthogroups_2024-Update
GRMZM2G030203 No alias Ribosomal protein L10 family protein 0.04 Orthogroups_2024-Update
Kfl00038_0340 kfl00038_0340_v1.1 (o80362|rk10_tobac : 145.0) 50S ribosomal protein L10,... 0.04 Orthogroups_2024-Update
Potri.010G215900 No alias Ribosomal protein L10 family protein 0.03 Orthogroups_2024-Update
Pp1s200_69V6 No alias 50s ribosomal protein l10 0.04 Orthogroups_2024-Update
Seita.9G445100.1 No alias component *(uL10) of organelle large ribosomal-subunit... 0.06 Orthogroups_2024-Update
Sobic.001G411300.1 No alias component *(uL10) of organelle large ribosomal-subunit... 0.04 Orthogroups_2024-Update
Sopen04g004700 No alias Ribosomal protein L10 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 97 181
No external refs found!