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  5. HORVU4Hr1G059120.2

HORVU4Hr1G059120.2


Description : UDP-L-rhamnose synthase *(RHM)


Gene families : OG_42_0000886 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000886_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G059120.2
Cluster HCAA Clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Glyma.17G132500 No alias nucleotide-rhamnose synthase/epimerase-reductase 0.03 Orthogroups_2024-Update
Kfl00409_0080 kfl00409_0080_v1.1 (at1g53500 : 1034.0) encodes a putative NDP-L-rhamnose... 0.02 Orthogroups_2024-Update
Mp6g02720.1 No alias UDP-L-rhamnose synthase 0.02 Orthogroups_2024-Update
PSME_00018936-RA No alias (at1g63000 : 514.0) nucleotide-rhamnose... 0.02 Orthogroups_2024-Update
Potri.011G103700 No alias rhamnose biosynthesis 1 0.03 Orthogroups_2024-Update
Solyc08g080140 No alias 3,5-epimerase/4-reductase (AHRD V3.3 *** I3SMF8_MEDTR) 0.03 Orthogroups_2024-Update
evm.model.tig00020553.161 No alias (at1g63000 : 180.0) nucleotide-rhamnose... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006897 endocytosis IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 58 363
IPR029903 RmlD-like-bd 437 608
No external refs found!