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  5. HORVU4Hr1G063960.3

HORVU4Hr1G063960.3


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G063960.3
Cluster HCAA Clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
132472 No alias mitochondrial editing factor 22 0.03 Orthogroups_2024-Update
399 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g00381 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g36120 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g36900 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g22840 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g61387 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g04890 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g29450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g47510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g30190 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Orthogroups_2024-Update
Glyma.09G286300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os03g13830 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g27880 No alias tetratricopeptide-like helical, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g39970 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os10g34720 No alias LOI1, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s276_42V6 No alias F4I10.100; pentatricopeptide (PPR) repeat-containing... 0.02 Orthogroups_2024-Update
Seita.4G046800.1 No alias RNA editing factor *(MEF29) 0.04 Orthogroups_2024-Update
Sobic.002G007000.2 No alias RNA editing factor *(ELI1) 0.03 Orthogroups_2024-Update
Sobic.002G200500.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G272600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G008400.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G081000.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G153600.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 355 402
IPR002885 Pentatricopeptide_repeat 257 300
IPR032867 DYW_dom 571 653
IPR002885 Pentatricopeptide_repeat 430 454
IPR002885 Pentatricopeptide_repeat 188 215
IPR002885 Pentatricopeptide_repeat 162 186
No external refs found!