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  5. Solyc03g082530

Solyc03g082530


Description : Small auxin up-regulated RNA37


Gene families : OG_42_0001365 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001365_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g082530
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Brara.B01441.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I00084.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.07G051700 No alias SAUR-like auxin-responsive protein family 0.02 Orthogroups_2024-Update
Glyma.16G020700 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.16G020800 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
MA_10386g0020 No alias (at3g61900 : 112.0) SAUR-like auxin-responsive protein... 0.03 Orthogroups_2024-Update
MA_216008g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_43064g0010 No alias (at3g61900 : 105.0) SAUR-like auxin-responsive protein... 0.03 Orthogroups_2024-Update
MA_5864g0010 No alias (at2g46690 : 113.0) SAUR-like auxin-responsive protein... 0.03 Orthogroups_2024-Update
Seita.9G194600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G196900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g022270 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update
Sopen03g022280 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003676 SAUR_fam 33 99
No external refs found!