HORVU4Hr1G074270.1

Description : component *(eS27) of small ribosomal-subunit (SSU) proteome

Gene families : OG_42_0001909 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001909_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU4Hr1G074270.1
Cluster	HCAA Clusters: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
163947	No alias	ribosomal protein S27	0.02	Orthogroups_2024-Update
A4A49_15619	No alias	40s ribosomal protein s27-2	0.06	Orthogroups_2024-Update
At2g45710	No alias	40S ribosomal protein S27-1...	0.07	Orthogroups_2024-Update
Bradi3g43475	No alias	ribosomal protein S27	0.06	Orthogroups_2024-Update
Bradi5g08453	No alias	ribosomal protein S27	0.08	Orthogroups_2024-Update
Brara.B03416.1	No alias	component *(eS27) of small ribosomal-subunit (SSU) proteome	0.11	Orthogroups_2024-Update
Brara.F03041.1	No alias	component *(eS27) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Brara.G01908.1	No alias	component *(eS27) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Brara.I00365.1	No alias	component *(eS27) of small ribosomal-subunit (SSU) proteome	0.12	Orthogroups_2024-Update
Brara.I04203.1	No alias	component *(eS27) of small ribosomal-subunit (SSU) proteome	0.1	Orthogroups_2024-Update
Cre12.g529400	No alias	ribosomal protein S27	0.11	Orthogroups_2024-Update
GRMZM2G066222	No alias	ribosomal protein S27	0.04	Orthogroups_2024-Update
Glyma.16G046500	No alias	ribosomal protein S27	0.03	Orthogroups_2024-Update
Glyma.19G105700	No alias	ribosomal protein S27	0.06	Orthogroups_2024-Update
HORVU7Hr1G112740.4	No alias	component *(eS27) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
LOC_Os04g27860	No alias	40S ribosomal protein S27, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g32710	No alias	40S ribosomal protein S27, putative, expressed	0.04	Orthogroups_2024-Update
MA_87055g0010	No alias	(at3g61110 : 146.0) Arabidopsis ribosomal protein;...	0.05	Orthogroups_2024-Update
Mp5g09510.1	No alias	component RPS27 of SSU proteome	0.02	Orthogroups_2024-Update
PSME_00029823-RA	No alias	(at3g61110 : 146.0) Arabidopsis ribosomal protein;...	0.06	Orthogroups_2024-Update
Potri.003G161200	No alias	ribosomal protein S27	0.05	Orthogroups_2024-Update
Potri.006G192900	No alias	ribosomal protein S27	0.03	Orthogroups_2024-Update
Pp1s165_39V6	No alias	40s ribosomal protein	0.07	Orthogroups_2024-Update
Pp1s17_304V6	No alias	40s ribosomal protein	0.03	Orthogroups_2024-Update
Pp1s63_161V6	No alias	40s ribosomal protein	0.06	Orthogroups_2024-Update
Seita.1G160500.1	No alias	component *(eS27) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Seita.7G081100.1	No alias	component *(eS27) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Sobic.001G091801.1	No alias	component *(eS27) of small ribosomal-subunit (SSU) proteome	0.12	Orthogroups_2024-Update
Sobic.004G145801.1	No alias	component *(eS27) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Solyc01g008090	No alias	40S ribosomal protein S27 (AHRD V3.3 - M0TJU4_MUSAM)	0.09	Orthogroups_2024-Update
Sopen01g003640	No alias	Ribosomal protein S27	0.11	Orthogroups_2024-Update
evm.model.tig00001299.2	No alias	(at5g47930 : 145.0) Zinc-binding ribosomal protein...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Predicted GO
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005643	nuclear pore	IEP	Predicted GO
CC	GO:0005737	cytoplasm	IEP	Predicted GO
CC	GO:0005759	mitochondrial matrix	IEP	Predicted GO
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Predicted GO
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	Predicted GO
BP	GO:0006353	DNA-templated transcription, termination	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0006886	intracellular protein transport	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0009112	nucleobase metabolic process	IEP	Predicted GO
MF	GO:0010011	auxin binding	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0017056	structural constituent of nuclear pore	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Predicted GO
CC	GO:0030126	COPI vesicle coat	IEP	Predicted GO
CC	GO:0031974	membrane-enclosed lumen	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0042562	hormone binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
CC	GO:0043233	organelle lumen	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044429	mitochondrial part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
BP	GO:0046112	nucleobase biosynthetic process	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0046907	intracellular transport	IEP	Predicted GO
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0051649	establishment of localization in cell	IEP	Predicted GO
CC	GO:0070013	intracellular organelle lumen	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000592	Ribosomal_S27e	30	84

External Links

No external refs found!

HORVU4Hr1G074270.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation