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  5. HORVU4Hr1G077060.4

HORVU4Hr1G077060.4


Description : ABC-B-type transporter *(AMN3) & subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G077060.4
Cluster HCAA Clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
229984 No alias ABC transporter family protein 0.04 Orthogroups_2024-Update
GRMZM2G025860 No alias ABC transporter family protein 0.02 Orthogroups_2024-Update
Glyma.02G008000 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Glyma.10G137600 No alias ATP binding cassette subfamily B4 0.04 Orthogroups_2024-Update
HORVU2Hr1G080200.1 No alias auxin efflux transporter *(ABCB19) & subfamily ABCB transporter 0.05 Orthogroups_2024-Update
MA_3437g0010 No alias (at3g28345 : 1374.0) ABC transporter family protein;... 0.03 Orthogroups_2024-Update
Sopen06g004020 No alias ABC transporter transmembrane region 0.04 Orthogroups_2024-Update
Sopen06g004030 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 443 591
IPR003439 ABC_transporter-like 1083 1231
IPR011527 ABC1_TM_dom 103 373
IPR011527 ABC1_TM_dom 742 1012
No external refs found!