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  5. HORVU4Hr1G078710.1

HORVU4Hr1G078710.1


Description : Unknown function


Gene families : OG_42_0001160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G078710.1
Cluster HCAA Clusters: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G006287 No alias pumilio 7 0.02 Orthogroups_2024-Update
LOC_Os03g09150 No alias pumilio-family RNA binding repeat domain containing... 0.03 Orthogroups_2024-Update
Potri.002G095400 No alias pumilio 7 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 202 235
IPR001313 Pumilio_RNA-bd_rpt 314 346
IPR001313 Pumilio_RNA-bd_rpt 243 274
IPR001313 Pumilio_RNA-bd_rpt 350 369
IPR001313 Pumilio_RNA-bd_rpt 387 416
IPR001313 Pumilio_RNA-bd_rpt 285 309
IPR001313 Pumilio_RNA-bd_rpt 168 199
No external refs found!