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Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU4Hr1G080660.1 | |
| Cluster | HCAA Clusters: Cluster_298 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 128850 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At3g03580 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g36120 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi2g11440 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi2g22840 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi2g61387 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g04890 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.E00324.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g72930 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os03g13230 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_110g0010 | No alias | (at4g02750 : 501.0) Tetratricopeptide repeat (TPR)-like... | 0.05 | Orthogroups_2024-Update | |
| MA_442926g0010 | No alias | (at4g13650 : 697.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| MA_6329g0010 | No alias | (at4g02750 : 542.0) Tetratricopeptide repeat (TPR)-like... | 0.05 | Orthogroups_2024-Update | |
| MA_9258g0010 | No alias | (at4g13650 : 664.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00010760-RA | No alias | (at4g18750 : 196.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Potri.007G050200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.7G329200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.9G057100.1 | No alias | RNA editing factor *(OTP85) | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G237100.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.005G008400.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015693 | magnesium ion transport | IEP | Predicted GO |
| BP | GO:0070838 | divalent metal ion transport | IEP | Predicted GO |
| BP | GO:0072511 | divalent inorganic cation transport | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 280 | 327 |
| IPR002885 | Pentatricopeptide_repeat | 481 | 528 |
| IPR002885 | Pentatricopeptide_repeat | 152 | 177 |
| IPR002885 | Pentatricopeptide_repeat | 254 | 279 |
| IPR002885 | Pentatricopeptide_repeat | 180 | 207 |
| IPR002885 | Pentatricopeptide_repeat | 383 | 408 |
| IPR002885 | Pentatricopeptide_repeat | 355 | 379 |
| IPR032867 | DYW_dom | 723 | 792 |
| No external refs found! |