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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU4Hr1G080840.1 | |
| Cluster | HCAA Clusters: Cluster_331 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_19370 | No alias | ring-h2 finger protein atl70 | 0.01 | Orthogroups_2024-Update | |
| A4A49_37314 | No alias | e3 ubiquitin-protein ligase atl9 | 0.01 | Orthogroups_2024-Update | |
| Brara.B02007.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.C03025.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.G02364.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G026562 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G386584 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.01G157400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G210400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.08G070100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.09G140800 | No alias | carbon/nitrogen insensitive 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G205600 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.09G253500 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.14G178400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G069960.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G082830.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G087860.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G107430.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G121570.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| LOC_Os02g15100 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os09g36500 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g24530 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_80729g0030 | No alias | (at3g16720 : 139.0) RING-H2 protein induced after... | 0.03 | Orthogroups_2024-Update | |
| Pp1s38_53V6 | No alias | ring-h2 finger protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s71_162V6 | No alias | ring finger | 0.02 | Orthogroups_2024-Update | |
| Seita.3G209600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.3G374600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.7G205000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G147301.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G339400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.008G030200.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc09g075320 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT4G15975.1) | 0.03 | Orthogroups_2024-Update | |
| Solyc11g005320 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) | 0.02 | Orthogroups_2024-Update | |
| Sopen06g017190 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen06g021450 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen06g021460 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen06g021470 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen11g001320 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000776 | kinetochore | IEP | Predicted GO |
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
| MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Predicted GO |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006788 | heme oxidation | IEP | Predicted GO |
| CC | GO:0009539 | photosystem II reaction center | IEP | Predicted GO |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015297 | antiporter activity | IEP | Predicted GO |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Predicted GO |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Predicted GO |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
| CC | GO:0031262 | Ndc80 complex | IEP | Predicted GO |
| BP | GO:0042168 | heme metabolic process | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 26 | 69 |
| No external refs found! |