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At3g12770


Description : Pentatricopeptide repeat-containing protein At3g12770 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTV8]


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g12770
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
MA_10432670g0020 No alias (at3g02010 : 676.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00053797-RA No alias (at4g02750 : 615.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
Seita.6G159500.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 561 684
IPR002885 Pentatricopeptide_repeat 186 232
IPR002885 Pentatricopeptide_repeat 82 129
IPR002885 Pentatricopeptide_repeat 286 334
IPR002885 Pentatricopeptide_repeat 388 434
IPR002885 Pentatricopeptide_repeat 362 385
IPR002885 Pentatricopeptide_repeat 462 485
No external refs found!