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  5. HORVU4Hr1G082970.2

HORVU4Hr1G082970.2


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G082970.2
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
421625 No alias FASCICLIN-like arabinogalactan protein 8 0.02 Orthogroups_2024-Update
A4A49_05662 No alias fasciclin-like arabinogalactan protein 3 0.03 Orthogroups_2024-Update
Bradi2g23270 No alias Fasciclin-like arabinogalactan family protein 0.03 Orthogroups_2024-Update
Bradi5g04846 No alias FASCICLIN-like arabinogalactan protein 14 precursor 0.04 Orthogroups_2024-Update
HORVU4Hr1G082750.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
LOC_Os09g07350 No alias fasciclin-like arabinogalactan protein 8 precursor,... 0.02 Orthogroups_2024-Update
PSME_00037137-RA No alias (at2g45470 : 298.0) FASCICLIN-like arabinogalactan... 0.02 Orthogroups_2024-Update
PSME_00056717-RA No alias (at2g45470 : 275.0) FASCICLIN-like arabinogalactan... 0.03 Orthogroups_2024-Update
Seita.2G154700.1 No alias Fasciclin-type arabinogalactan protein 0.05 Orthogroups_2024-Update
Seita.6G110400.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
Sobic.002G154600.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
Solyc12g006110 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 211 345
No external refs found!