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  5. HORVU4Hr1G084420.2

HORVU4Hr1G084420.2


Description : component *(eL21) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0002269 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G084420.2
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
170832 No alias Translation protein SH3-like family protein 0.03 Orthogroups_2024-Update
At1g57660 No alias 60S ribosomal protein L21-2... 0.02 Orthogroups_2024-Update
Bradi1g75620 No alias Translation protein SH3-like family protein 0.03 Orthogroups_2024-Update
Bradi3g28220 No alias Translation protein SH3-like family protein 0.03 Orthogroups_2024-Update
Brara.H02810.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.I01623.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.I05263.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre06.g278135 No alias Translation protein SH3-like family protein 0.05 Orthogroups_2024-Update
GRMZM2G026216 No alias Translation protein SH3-like family protein 0.02 Orthogroups_2024-Update
Glyma.03G207500 No alias Translation protein SH3-like family protein 0.04 Orthogroups_2024-Update
Glyma.19G205000 No alias Translation protein SH3-like family protein 0.03 Orthogroups_2024-Update
PSME_00039521-RA No alias (at1g57860 : 292.0) Translation protein SH3-like family... 0.02 Orthogroups_2024-Update
Potri.003G159500 No alias Translation protein SH3-like family protein 0.03 Orthogroups_2024-Update
Pp1s298_23V6 No alias 60s ribosomal protein l21 0.03 Orthogroups_2024-Update
Seita.9G544700.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.001G226500.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.001G508900.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Solyc10g078960 No alias 60S ribosomal protein L21-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc10g080590 No alias 60S ribosomal protein L21-like protein (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen10g029590 No alias Ribosomal protein L21e 0.05 Orthogroups_2024-Update
Sopen10g031130 No alias Ribosomal protein L21e 0.03 Orthogroups_2024-Update
evm.model.contig_4456.21 No alias (at1g57860 : 119.0) Translation protein SH3-like family... 0.04 Orthogroups_2024-Update
evm.model.tig00000640.5 No alias (at1g57860 : 125.0) Translation protein SH3-like family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 27 127
No external refs found!