HORVU4Hr1G084830.2

Description : component *(uL11c) of large plastid ribosomal-subunit proteome

Gene families : OG_42_0006605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006605_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU4Hr1G084830.2
Cluster	HCAA Clusters: Cluster_158

Target	Alias	Description	ECC score	Gene Family Method
230830	No alias	plastid ribosomal protein l11	0.05	Orthogroups_2024-Update
A4A49_31578	No alias	50s ribosomal protein l11, chloroplastic	0.05	Orthogroups_2024-Update
Bradi1g77060	No alias	plastid ribosomal protein l11	0.2	Orthogroups_2024-Update
Brara.I02689.1	No alias	component *(uL11c) of large plastid ribosomal-subunit proteome	0.21	Orthogroups_2024-Update
Cre10.g423650	No alias	plastid ribosomal protein l11	0.13	Orthogroups_2024-Update
GRMZM2G176820	No alias	plastid ribosomal protein l11	0.11	Orthogroups_2024-Update
Glyma.01G201000	No alias	plastid ribosomal protein l11	0.02	Orthogroups_2024-Update
Kfl00092_0090	kfl00092_0090_v1.1	(at1g32990 : 190.0) mutant has Decreased effective...	0.11	Orthogroups_2024-Update
LOC_Os03g03020	No alias	L11 domain containing ribosomal protein, putative, expressed	0.06	Orthogroups_2024-Update
Mp7g12110.1	No alias	component psRPL11 of large ribosomal subunit proteome	0.03	Orthogroups_2024-Update
Potri.001G450800	No alias	plastid ribosomal protein l11	0.16	Orthogroups_2024-Update
Potri.011G150700	No alias	plastid ribosomal protein l11	0.04	Orthogroups_2024-Update
Pp1s141_43V6	No alias	ribosomal protein l11	0.13	Orthogroups_2024-Update
Seita.9G561900.1	No alias	component *(uL11c) of large plastid ribosomal-subunit proteome	0.15	Orthogroups_2024-Update
Sobic.001G527100.1	No alias	component *(uL11c) of large plastid ribosomal-subunit proteome	0.14	Orthogroups_2024-Update
Sopen08g031560	No alias	Ribosomal protein L11, N-terminal domain	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0003747	translation release factor activity	IEP	Predicted GO
MF	GO:0004109	coproporphyrinogen oxidase activity	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006415	translational termination	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0008079	translation termination factor activity	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
BP	GO:0022411	cellular component disassembly	IEP	Predicted GO
BP	GO:0032984	protein-containing complex disassembly	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
BP	GO:0043624	cellular protein complex disassembly	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR020783	Ribosomal_L11_C	145	213
IPR020784	Ribosomal_L11_N	83	140

External Links

No external refs found!

HORVU4Hr1G084830.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation