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  5. At3g12920

At3g12920


Description : Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g12920
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Bradi5g08790 No alias SBP (S-ribonuclease binding protein) family protein 0.04 Orthogroups_2024-Update
Brara.B02813.1 No alias E3 ubiquitin ligase *(BRG) 0.03 Orthogroups_2024-Update
Brara.C03441.1 No alias E3 ubiquitin ligase *(BRG) 0.03 Orthogroups_2024-Update
Brara.E02816.1 No alias E3 ubiquitin ligase *(BRG) 0.03 Orthogroups_2024-Update
Brara.F03573.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.11G091300 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Glyma.17G150900 No alias SBP (S-ribonuclease binding protein) family protein 0.05 Orthogroups_2024-Update
Glyma.20G022400 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
MA_114475g0010 No alias (at1g45976 : 149.0) S-ribonuclease binding protein 1... 0.03 Orthogroups_2024-Update
Seita.1G176900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g078760 No alias CONSTANS interacting protein 4 0.03 Orthogroups_2024-Update
Solyc08g077460 No alias SBP (S-ribonuclease binding protein) family protein... 0.04 Orthogroups_2024-Update
Solyc10g055560 No alias SBP (S-ribonuclease binding protein) family protein... 0.04 Orthogroups_2024-Update
Sopen06g021170 No alias Zinc finger, C3HC4 type (RING finger) 0.03 Orthogroups_2024-Update
Sopen08g003070 No alias Zinc finger, C3HC4 type (RING finger) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!