1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU4Hr1G086000.1

HORVU4Hr1G086000.1


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0001898 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001898_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G086000.1
Cluster HCAA Clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g02560 No alias cyclin-like F-box, putative, expressed 0.04 Orthogroups_2024-Update
Pp1s22_56V6 No alias T18A10.29; F-box family protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.6G020100.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Seita.9G567300.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Sobic.001G531900.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Solyc03g026170 No alias F-box protein (AHRD V3.3 *** A0A0B2QYU7_GLYSO) 0.02 Orthogroups_2024-Update
Sopen01g037480 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen01g037500 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!