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  5. Solyc03g082640

Solyc03g082640


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT2G46620.1)


Gene families : OG_42_0003715 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003715_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g082640
Cluster HCCA clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
A4A49_29338 No alias aaa-atpase 0.03 Orthogroups_2024-Update
A4A49_31295 No alias aaa-atpase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 20 111
IPR003959 ATPase_AAA_core 223 340
No external refs found!