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  5. HORVU4Hr1G088080.4

HORVU4Hr1G088080.4


Description : Unknown function


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G088080.4
Cluster HCAA Clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
A4A49_26120 No alias expansin-b3 0.02 Orthogroups_2024-Update
At2g20750 No alias Expansin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU2] 0.03 Orthogroups_2024-Update
At4g28250 No alias EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9] 0.03 Orthogroups_2024-Update
Bradi3g50740 No alias expansin B2 0.03 Orthogroups_2024-Update
Brara.A01798.1 No alias beta-class expansin 0.02 Orthogroups_2024-Update
Brara.E00483.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.11G166546 No alias expansin B2 0.04 Orthogroups_2024-Update
HORVU4Hr1G088140.2 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU5Hr1G092910.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G060410.2 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00005304-RA No alias (q6h676|exb11_orysa : 186.0) Expansin-B11 precursor... 0.03 Orthogroups_2024-Update
PSME_00010298-RA No alias (at2g20750 : 169.0) member of BETA-EXPANSINS. Naming... 0.04 Orthogroups_2024-Update
PSME_00015392-RA No alias (at2g20750 : 239.0) member of BETA-EXPANSINS. Naming... 0.03 Orthogroups_2024-Update
PSME_00025248-RA No alias (q6h676|exb11_orysa : 171.0) Expansin-B11 precursor... 0.04 Orthogroups_2024-Update
PSME_00037216-RA No alias (at2g20750 : 216.0) member of BETA-EXPANSINS. Naming... 0.03 Orthogroups_2024-Update
PSME_00041021-RA No alias (at4g28250 : 171.0) putative beta-expansin/allergen... 0.03 Orthogroups_2024-Update
Pp1s313_58V6 No alias beta-expansin 3 0.02 Orthogroups_2024-Update
Seita.2G122700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G122800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G177400.1 No alias beta-class expansin 0.03 Orthogroups_2024-Update
Seita.9G157100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G327000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G300800.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G301600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G542100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen07g028100 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 294 387
IPR009009 RlpA-like_DPBB 201 281
No external refs found!