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  5. HORVU4Hr1G090440.2

HORVU4Hr1G090440.2


Description : organellar chaperone *(Clp-p/Clp-m)


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G090440.2
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
411118 No alias casein lytic proteinase B3 0.03 Orthogroups_2024-Update
Bradi2g49660 No alias heat shock protein 101 0.03 Orthogroups_2024-Update
Bradi3g06107 No alias casein lytic proteinase B4 0.02 Orthogroups_2024-Update
Bradi3g44335 No alias CLPC homologue 1 0.05 Orthogroups_2024-Update
Bradi3g44341 No alias CLPC homologue 1 0.05 Orthogroups_2024-Update
Bradi3g45124 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
Brara.C01504.1 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.04 Orthogroups_2024-Update
Cre12.g533351 No alias heat shock protein 101 0.01 Orthogroups_2024-Update
Cre43.g760497 No alias CLPC homologue 1 0.01 Orthogroups_2024-Update
GRMZM2G009443 No alias CLPC homologue 1 0.03 Orthogroups_2024-Update
Glyma.06G165200 No alias CLPC homologue 1 0.02 Orthogroups_2024-Update
Kfl00101_0070 kfl00101_0070_v1.1 (at5g50920 : 1253.0) Encodes a protein that is similar... 0.03 Orthogroups_2024-Update
MA_596288g0010 No alias (at5g50920 : 437.0) Encodes a protein that is similar to... 0.03 Orthogroups_2024-Update
MA_8117g0010 No alias (at5g50920 : 620.0) Encodes a protein that is similar to... 0.04 Orthogroups_2024-Update
Mp1g02560.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.03 Orthogroups_2024-Update
Mp3g09010.1 No alias organellar chaperone (Clp-p|Clp-m) 0.02 Orthogroups_2024-Update
PSME_00000476-RA No alias (q6f2y7|hs101_orysa : 1375.0) Heat shock protein 101 -... 0.02 Orthogroups_2024-Update
PSME_00004919-RA No alias (at2g25140 : 1357.0) Encodes ClpB4, which belongs to the... 0.03 Orthogroups_2024-Update
Pp1s196_10V6 No alias chaperone clpb expressed 0.02 Orthogroups_2024-Update
Pp1s23_102V6 No alias atpase aaa-2 domain protein 0.04 Orthogroups_2024-Update
Pp1s252_87V6 No alias atpase aaa-2 domain protein 0.02 Orthogroups_2024-Update
Pp1s300_55V6 No alias heat shock protein 101 0.03 Orthogroups_2024-Update
Seita.3G091800.1 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
Seita.7G079400.1 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.04 Orthogroups_2024-Update
Sobic.006G058100.1 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
Solyc03g118340 No alias Chloroplast ATP-dependent Clp protease chaperone protein... 0.05 Orthogroups_2024-Update
Sopen02g033340 No alias AAA domain (Cdc48 subfamily) 0.03 Orthogroups_2024-Update
evm.model.contig_487.1 No alias (p35100|clpc_pea : 624.0) ATP-dependent Clp protease... 0.01 Orthogroups_2024-Update
evm.model.tig00000655.28 No alias (at5g50920 : 1134.0) Encodes a protein that is similar... 0.02 Orthogroups_2024-Update
evm.model.tig00020563.86 No alias (at5g50920 : 990.0) Encodes a protein that is similar to... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 938 1018
IPR004176 Clp_N 180 231
IPR004176 Clp_N 258 308
IPR003959 ATPase_AAA_core 763 931
IPR003959 ATPase_AAA_core 366 498
No external refs found!