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  5. HORVU5Hr1G001670.1

HORVU5Hr1G001670.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G001670.1
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
A4A49_15965 No alias csc1-like protein erd4 0.03 Orthogroups_2024-Update
A4A49_29826 No alias csc1-like protein rxw8 0.03 Orthogroups_2024-Update
At3g54510 No alias Hyperosmolality-gated Ca2+ permeable channel 2.5... 0.02 Orthogroups_2024-Update
Brara.G02874.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
GRMZM2G164470 No alias lipases;hydrolases, acting on ester bonds 0.02 Orthogroups_2024-Update
Glyma.03G151300 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Glyma.07G263300 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G004230.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
HORVU2Hr1G060390.2 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
LOC_Os03g47070 No alias RXW8, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g04480.1 No alias calcium-permeable channel (OSCA) 0.02 Orthogroups_2024-Update
PSME_00017239-RA No alias (at1g30360 : 733.0) early-responsive to dehydration 4... 0.03 Orthogroups_2024-Update
Potri.001G358300 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Orthogroups_2024-Update
Potri.004G006100 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Pp1s78_98V6 No alias early-responsive to dehydrationexpressed 0.02 Orthogroups_2024-Update
Sobic.003G181600.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Solyc06g084330 No alias ERD (early-responsive to dehydration stress) family... 0.03 Orthogroups_2024-Update
Sopen08g024920 No alias Domain of unknown function DUF221 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032880 Csc1_N 6 164
IPR003864 RSN1_7TM 346 612
IPR027815 PHM7_cyt 186 335
No external refs found!