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  5. HORVU5Hr1G005300.1

HORVU5Hr1G005300.1


Description : Unknown function


Gene families : OG_42_0002839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G005300.1
Cluster HCAA Clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g43380 No alias thaumatin, putative, expressed 0.02 Orthogroups_2024-Update
MA_4708809g0010 No alias (p31110|tlp_orysa : 132.0) Thaumatin-like protein... 0.02 Orthogroups_2024-Update
PSME_00033593-RA No alias (p31110|tlp_orysa : 118.0) Thaumatin-like protein... 0.03 Orthogroups_2024-Update
PSME_00042124-RA No alias (p31110|tlp_orysa : 110.0) Thaumatin-like protein... 0.03 Orthogroups_2024-Update
PSME_00055391-RA No alias (p31110|tlp_orysa : 204.0) Thaumatin-like protein... 0.03 Orthogroups_2024-Update
Sobic.008G182300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.008G182500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G182600.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.008G182700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.008G182800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.008G182900.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.008G183300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
BP GO:0000725 recombinational repair IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 29 131
No external refs found!