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  5. HORVU5Hr1G008760.2

HORVU5Hr1G008760.2


Description : Unknown function


Gene families : OG_42_0009878 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009878_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G008760.2
Cluster HCAA Clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Bradi4g01620 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
Seita.3G392500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G171500.3 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0004817 cysteine-tRNA ligase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 304 334
IPR002885 Pentatricopeptide_repeat 513 544
IPR002885 Pentatricopeptide_repeat 342 370
IPR002885 Pentatricopeptide_repeat 624 648
IPR002885 Pentatricopeptide_repeat 450 480
IPR002885 Pentatricopeptide_repeat 552 600
IPR002885 Pentatricopeptide_repeat 377 426
IPR002885 Pentatricopeptide_repeat 236 285
IPR002885 Pentatricopeptide_repeat 156 210
No external refs found!