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  5. At3g13470

At3g13470


Description : Chaperonin 60 subunit beta 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LJE4]


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g13470
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
168153 No alias chaperonin 60 beta 0.02 Orthogroups_2024-Update
405358 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
Bradi1g50270 No alias chaperonin 60 beta 0.03 Orthogroups_2024-Update
Bradi2g18260 No alias heat shock protein 60-3A 0.05 Orthogroups_2024-Update
Bradi3g28070 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
Brara.C03496.1 No alias chaperone *(Hsp60) 0.05 Orthogroups_2024-Update
Brara.C03936.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Brara.D01674.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Brara.E01070.1 No alias chaperone *(Hsp60) 0.05 Orthogroups_2024-Update
Brara.K01619.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.05 Orthogroups_2024-Update
Cre06.g309100 No alias heat shock protein 60 0.01 Orthogroups_2024-Update
Glyma.01G069500 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Glyma.02G126300 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
Glyma.07G009600 No alias heat shock protein 60-3A 0.06 Orthogroups_2024-Update
Glyma.10G127800 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
HORVU1Hr1G079910.6 No alias chaperone *(Hsp60) 0.02 Orthogroups_2024-Update
HORVU2Hr1G007840.7 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
HORVU4Hr1G078820.3 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Kfl00292_0140 kfl00292_0140_v1.1 (q05046|ch62_cucma : 837.0) Chaperonin CPN60-2,... 0.01 Orthogroups_2024-Update
MA_97627g0010 No alias (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.02 Orthogroups_2024-Update
PSME_00000058-RA No alias (at3g13470 : 709.0) TCP-1/cpn60 chaperonin family... 0.04 Orthogroups_2024-Update
PSME_00000537-RA No alias (p21239|rub1_brana : 764.0) RuBisCO large... 0.05 Orthogroups_2024-Update
PSME_00011075-RA No alias (q05046|ch62_cucma : 883.0) Chaperonin CPN60-2,... 0.03 Orthogroups_2024-Update
PSME_00016110-RA No alias (p08926|ruba_pea : 852.0) RuBisCO large subunit-binding... 0.02 Orthogroups_2024-Update
Potri.002G252900 No alias heat shock protein 60 0.06 Orthogroups_2024-Update
Potri.010G135100 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Pp1s149_289V6 No alias -like atpase 0.02 Orthogroups_2024-Update
Pp1s52_245V6 No alias -like atpase 0.03 Orthogroups_2024-Update
Seita.3G163700.1 No alias chaperone *(Hsp60) 0.02 Orthogroups_2024-Update
Seita.3G283900.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Seita.4G010900.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.05 Orthogroups_2024-Update
Sobic.001G228200.1 No alias chaperone *(Hsp60) 0.02 Orthogroups_2024-Update
Sobic.002G131000.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.02 Orthogroups_2024-Update
Sobic.009G098100.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Sobic.009G214100.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Sobic.010G011200.1 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.03 Orthogroups_2024-Update
Solyc01g028810 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.03 Orthogroups_2024-Update
Solyc02g068730 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.04 Orthogroups_2024-Update
Solyc03g120850 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.03 Orthogroups_2024-Update
Solyc05g053470 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.02 Orthogroups_2024-Update
Solyc09g091180 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.05 Orthogroups_2024-Update
Solyc11g069790 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.04 Orthogroups_2024-Update
Sopen01g016850 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
Sopen03g039670 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
Sopen03g040450 No alias TCP-1/cpn60 chaperonin family 0.05 Orthogroups_2024-Update
Sopen05g031970 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen09g034150 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
evm.model.contig_3433.6 No alias (at1g55490 : 394.0) encodes the beta subunit of the... 0.01 Orthogroups_2024-Update
evm.model.contig_4417.1 No alias (at2g28000 : 575.0) Encodes chaperonin-60 alpha, a... 0.01 Orthogroups_2024-Update
evm.model.contig_552.1 No alias (q05046|ch62_cucma : 684.0) Chaperonin CPN60-2,... 0.03 Orthogroups_2024-Update
evm.model.tig00001269.7 No alias (q05046|ch62_cucma : 728.0) Chaperonin CPN60-2,... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004797 thymidine kinase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0019136 deoxynucleoside kinase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019206 nucleoside kinase activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 74 577
No external refs found!