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Description : E3 ubiquitin ligase *(RMA/MUSE)
Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU5Hr1G011730.2 | |
| Cluster | HCAA Clusters: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_38153 | No alias | e3 ubiquitin-protein ligase rma1h1 | 0.06 | Orthogroups_2024-Update | |
| GRMZM2G400268 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.06G293400 | No alias | RING membrane-anchor 1 | 0.04 | Orthogroups_2024-Update | |
| Glyma.07G196000 | No alias | RING membrane-anchor 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G112000 | No alias | RING membrane-anchor 1 | 0.04 | Orthogroups_2024-Update | |
| Glyma.15G073700 | No alias | RING membrane-anchor 1 | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g42690 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g47500 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g43930 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| Potri.004G042700 | No alias | RING membrane-anchor 1 | 0.04 | Orthogroups_2024-Update | |
| Potri.011G051800 | No alias | RING membrane-anchor 1 | 0.03 | Orthogroups_2024-Update | |
| Pp1s72_212V6 | No alias | zinc c3hc4 type family protein | 0.02 | Orthogroups_2024-Update | |
| Seita.9G140300.1 | No alias | E3 ubiquitin ligase *(RMA/MUSE) | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G228100.2 | No alias | E3 ubiquitin ligase *(RMA/MUSE) | 0.03 | Orthogroups_2024-Update | |
| Sobic.006G157500.1 | No alias | E3 ubiquitin ligase *(RMA/MUSE) | 0.03 | Orthogroups_2024-Update | |
| Solyc02g078320 | No alias | RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1) | 0.05 | Orthogroups_2024-Update | |
| Solyc07g054080 | No alias | RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1) | 0.04 | Orthogroups_2024-Update | |
| Solyc07g063200 | No alias | RING/U-box superfamily protein (AHRD V3.3 *-* AT2G42030.1) | 0.02 | Orthogroups_2024-Update | |
| Sopen10g022970 | No alias | Zinc finger, C3HC4 type (RING finger) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
| MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
| BP | GO:0016255 | attachment of GPI anchor to protein | IEP | Predicted GO |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
| CC | GO:0042765 | GPI-anchor transamidase complex | IEP | Predicted GO |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027370 | Znf-RING_LisH | 42 | 80 |
| No external refs found! |