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  5. HORVU5Hr1G011920.1

HORVU5Hr1G011920.1


Description : Unknown function


Gene families : OG_42_0008601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G011920.1
Cluster HCAA Clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
MA_10428421g0010 No alias (at4g02750 : 749.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
Solyc04g039940 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 46 79
IPR002885 Pentatricopeptide_repeat 264 296
IPR002885 Pentatricopeptide_repeat 521 568
IPR002885 Pentatricopeptide_repeat 232 261
IPR002885 Pentatricopeptide_repeat 495 518
IPR002885 Pentatricopeptide_repeat 80 106
IPR002885 Pentatricopeptide_repeat 144 169
IPR002885 Pentatricopeptide_repeat 391 419
IPR002885 Pentatricopeptide_repeat 596 620
IPR002885 Pentatricopeptide_repeat 174 202
IPR002885 Pentatricopeptide_repeat 111 140
IPR002885 Pentatricopeptide_repeat 205 229
IPR002885 Pentatricopeptide_repeat 298 324
IPR002885 Pentatricopeptide_repeat 360 388
IPR002885 Pentatricopeptide_repeat 332 354
IPR002885 Pentatricopeptide_repeat 422 449
No external refs found!