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  5. HORVU5Hr1G017820.1

HORVU5Hr1G017820.1


Description : REM-type transcription factor


Gene families : OG_42_0000707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G017820.1
Cluster HCAA Clusters: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
Bradi4g02991 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
LOC_Os12g40080 No alias B3 DNA binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.3G372500.1 No alias REM-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G148600.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 237 322
IPR003340 B3_DNA-bd 4 86
No external refs found!