Description : component *(uL2) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0001760 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001760_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU5Hr1G021730.2 | |
Cluster | HCAA Clusters: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
170971 | No alias | Ribosomal protein L2 family | 0.08 | Orthogroups_2024-Update | |
A4A49_56239 | No alias | 60s ribosomal protein l8 | 0.1 | Orthogroups_2024-Update | |
A4A49_64891 | No alias | 60s ribosomal protein l8 | 0.03 | Orthogroups_2024-Update | |
Bradi4g04120 | No alias | Ribosomal protein L2 family | 0.13 | Orthogroups_2024-Update | |
Brara.A00238.1 | No alias | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.22 | Orthogroups_2024-Update | |
Brara.G00216.1 | No alias | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.17 | Orthogroups_2024-Update | |
Brara.K01326.1 | No alias | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.22 | Orthogroups_2024-Update | |
Cre12.g535851 | No alias | Ribosomal protein L2 family | 0.1 | Orthogroups_2024-Update | |
Glyma.01G167300 | No alias | Ribosomal protein L2 family | 0.15 | Orthogroups_2024-Update | |
Glyma.02G049300 | No alias | Ribosomal protein L2 family | 0.08 | Orthogroups_2024-Update | |
Glyma.11G076000 | No alias | Ribosomal protein L2 family | 0.06 | Orthogroups_2024-Update | |
Glyma.16G129700 | No alias | Ribosomal protein L2 family | 0.05 | Orthogroups_2024-Update | |
Kfl00779_0020 | kfl00779_0020_v1.1 | (at4g36130 : 456.0) Ribosomal protein L2 family;... | 0.04 | Orthogroups_2024-Update | |
Mp7g01860.1 | No alias | component RPL8 of LSU proteome component | 0.12 | Orthogroups_2024-Update | |
Mp7g08730.1 | No alias | component RPL8 of LSU proteome component | 0.03 | Orthogroups_2024-Update | |
PSME_00025506-RA | No alias | (at4g36130 : 481.0) Ribosomal protein L2 family;... | 0.05 | Orthogroups_2024-Update | |
Potri.007G013100 | No alias | Ribosomal protein L2 family | 0.05 | Orthogroups_2024-Update | |
Pp1s37_247V6 | No alias | 60s ribosomal protein l2 | 0.13 | Orthogroups_2024-Update | |
Seita.2G112000.1 | No alias | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.17 | Orthogroups_2024-Update | |
Seita.3G330100.1 | No alias | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
Sobic.002G115000.1 | No alias | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
Sobic.008G135000.1 | No alias | component *(uL2) of large ribosomal-subunit (LSU) proteome | 0.23 | Orthogroups_2024-Update | |
Solyc07g063890 | No alias | No description available | 0.07 | Orthogroups_2024-Update | |
Solyc10g006580 | No alias | ribosomal protein L2 | 0.08 | Orthogroups_2024-Update | |
Solyc12g005330 | No alias | Ribosomal protein L2 family (AHRD V3.3 *** AT4G36130.1) | 0.23 | Orthogroups_2024-Update | |
Sopen07g032020 | No alias | Ribosomal Proteins L2, C-terminal domain | 0.22 | Orthogroups_2024-Update | |
Sopen10g002530 | No alias | Ribosomal Proteins L2, C-terminal domain | 0.17 | Orthogroups_2024-Update | |
Sopen12g001310 | No alias | Ribosomal Proteins L2, C-terminal domain | 0.13 | Orthogroups_2024-Update | |
evm.model.contig_2057.10 | No alias | (at4g36130 : 380.0) Ribosomal protein L2 family;... | 0.27 | Orthogroups_2024-Update | |
evm.model.tig00020965.22 | No alias | (at2g18020 : 400.0) embryo defective 2296 (EMB2296);... | 0.06 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
BP | GO:0006497 | protein lipidation | IEP | Predicted GO |
BP | GO:0006505 | GPI anchor metabolic process | IEP | Predicted GO |
BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Predicted GO |
BP | GO:0006553 | lysine metabolic process | IEP | Predicted GO |
BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Predicted GO |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009085 | lysine biosynthetic process | IEP | Predicted GO |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Predicted GO |
MF | GO:0010011 | auxin binding | IEP | Predicted GO |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
MF | GO:0042562 | hormone binding | IEP | Predicted GO |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | Predicted GO |
BP | GO:0070070 | proton-transporting V-type ATPase complex assembly | IEP | Predicted GO |
BP | GO:0070071 | proton-transporting two-sector ATPase complex assembly | IEP | Predicted GO |
BP | GO:0070072 | vacuolar proton-transporting V-type ATPase complex assembly | IEP | Predicted GO |
No external refs found! |