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  5. HORVU5Hr1G023520.10

HORVU5Hr1G023520.10


Description : Unknown function


Gene families : OG_42_0000707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G023520.10
Cluster HCAA Clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Glyma.17G246000 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G013910.21 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g42290 No alias B3 DNA binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.3G372700.1 No alias REM-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G164800.1 No alias REM-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 315 411
IPR003340 B3_DNA-bd 176 258
No external refs found!