Description : histone *(H2A)
Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU5Hr1G026650.2 | |
Cluster | HCAA Clusters: Cluster_16 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
170948 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
76653 | No alias | histone H2A 2 | 0.02 | Orthogroups_2024-Update | |
A4A49_30810 | No alias | histone h2ax | 0.03 | Orthogroups_2024-Update | |
At1g54690 | No alias | Probable histone H2AXb [Source:UniProtKB/Swiss-Prot;Acc:Q9S9K7] | 0.03 | Orthogroups_2024-Update | |
At3g20670 | No alias | Probable histone H2A.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHQ5] | 0.04 | Orthogroups_2024-Update | |
Bradi1g25390 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
Bradi1g25400 | No alias | histone H2A 2 | 0.03 | Orthogroups_2024-Update | |
Bradi4g06010 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.A02813.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Brara.B01060.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
Brara.C01065.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Brara.F02852.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Brara.J01356.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Cre06.g265350 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre06.g268050 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre06.g268300 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g273900 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g274200 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g275850 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre13.g570100 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre17.g711700 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
Cre17.g713400 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
GRMZM2G041381 | No alias | histone H2A 2 | 0.04 | Orthogroups_2024-Update | |
GRMZM2G151726 | No alias | histone H2A 2 | 0.05 | Orthogroups_2024-Update | |
GRMZM2G151826 | No alias | histone H2A 2 | 0.03 | Orthogroups_2024-Update | |
Glyma.03G241800 | No alias | gamma histone variant H2AX | 0.03 | Orthogroups_2024-Update | |
Glyma.12G215500 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Glyma.13G333800 | No alias | histone H2A 12 | 0.03 | Orthogroups_2024-Update | |
Glyma.13G333900 | No alias | histone H2A 12 | 0.04 | Orthogroups_2024-Update | |
Glyma.13G334300 | No alias | histone H2A 12 | 0.05 | Orthogroups_2024-Update | |
Glyma.15G040200 | No alias | histone H2A 12 | 0.03 | Orthogroups_2024-Update | |
Glyma.15G040300 | No alias | histone H2A 12 | 0.03 | Orthogroups_2024-Update | |
Glyma.15G040400 | No alias | histone H2A 12 | 0.03 | Orthogroups_2024-Update | |
Glyma.19G234100 | No alias | histone H2A 7 | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G005870.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G006080.2 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
HORVU6Hr1G011490.2 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G100100.3 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G100110.4 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G100120.13 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G112470.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Kfl00099_g21 | kfl00099_g21_v1.1 | (q2qpg9|h2axb_orysa : 166.0) Probable histone H2AXb -... | 0.02 | Orthogroups_2024-Update | |
Kfl00125_0190 | kfl00125_0190_v1.1 | (p50567|h2a_chlre : 169.0) Histone H2A - Chlamydomonas... | 0.01 | Orthogroups_2024-Update | |
LOC_Os03g17100 | No alias | Core histone H2A/H2B/H3/H4 domain containing protein,... | 0.03 | Orthogroups_2024-Update | |
MA_10434390g0020 | No alias | (at4g27230 : 174.0) Encodes HTA2, a histone H2A... | 0.03 | Orthogroups_2024-Update | |
MA_22203g0020 | No alias | (at5g54640 : 145.0) Isolated from T-DNA insertion line,... | 0.03 | Orthogroups_2024-Update | |
MA_7320190g0010 | No alias | (p19177|h2a_petcr : 149.0) Histone H2A - Petroselinum... | 0.03 | Orthogroups_2024-Update | |
Mp3g00840.1 | No alias | histone (H2A) | 0.02 | Orthogroups_2024-Update | |
PSME_00008210-RA | No alias | (at1g54690 : 107.0) Encodes HTA3, a histone H2A protein.... | 0.02 | Orthogroups_2024-Update | |
PSME_00017670-RA | No alias | (p35063|h2ax_picab : 188.0) Histone H2AX - Picea abies... | 0.01 | Orthogroups_2024-Update | |
Sobic.001G416800.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
Sobic.002G059200.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
Solyc09g074300 | No alias | Histone H2A (AHRD V3.3 *** K4CV07_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Solyc09g082710 | No alias | Histone H2A (AHRD V3.3 *** K4CVP7_SOLLC) | 0.04 | Orthogroups_2024-Update | |
Solyc10g006560 | No alias | Histone H2A (AHRD V3.3 *** A0A0V0H7M3_SOLCH) | 0.03 | Orthogroups_2024-Update | |
Solyc11g073250 | No alias | Histone H2A (AHRD V3.3 *** K4DB31_SOLLC) | 0.02 | Orthogroups_2024-Update | |
Solyc11g073260 | No alias | Histone H2A (AHRD V3.3 *** K4DB32_SOLLC) | 0.02 | Orthogroups_2024-Update | |
Solyc12g005270 | No alias | Histone H2A (AHRD V3.3 *** K4DB65_SOLLC) | 0.04 | Orthogroups_2024-Update | |
Sopen01g042970 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen09g005140 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen09g031570 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
Sopen10g002510 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
Sopen11g030880 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
Sopen11g030890 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_533.4 | No alias | (p16866|h2a4_volca : 182.0) Histone H2A-IV - Volvox... | 0.01 | Orthogroups_2024-Update | |
evm.model.tig00001085.4 | No alias | (p16866|h2a4_volca : 154.0) Histone H2A-IV - Volvox... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
MF | GO:0004325 | ferrochelatase activity | IEP | Predicted GO |
MF | GO:0004664 | prephenate dehydratase activity | IEP | Predicted GO |
BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predicted GO |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0006783 | heme biosynthetic process | IEP | Predicted GO |
BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predicted GO |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
MF | GO:0016790 | thiolester hydrolase activity | IEP | Predicted GO |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
BP | GO:0042168 | heme metabolic process | IEP | Predicted GO |
BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
BP | GO:0046148 | pigment biosynthetic process | IEP | Predicted GO |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Predicted GO |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Predicted GO |
CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predicted GO |
No external refs found! |