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  5. HORVU5Hr1G039850.3

HORVU5Hr1G039850.3


Description : actin filament protein


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G039850.3
Cluster HCAA Clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Bradi4g41850 No alias actin 7 0.05 Orthogroups_2024-Update
Brara.A02909.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
GRMZM2G006765 No alias actin 7 0.03 Orthogroups_2024-Update
GRMZM2G047055 No alias actin-11 0.03 Orthogroups_2024-Update
Glyma.02G172800 No alias actin 1 0.04 Orthogroups_2024-Update
Glyma.04G215900 No alias actin 7 0.06 Orthogroups_2024-Update
Glyma.09G111200 No alias actin 1 0.05 Orthogroups_2024-Update
Glyma.13G335600 No alias actin-11 0.04 Orthogroups_2024-Update
Glyma.19G000900 No alias actin-11 0.02 Orthogroups_2024-Update
Glyma.19G147900 No alias actin 7 0.03 Orthogroups_2024-Update
MA_1964g0010 No alias (o81221|act_goshi : 729.0) Actin - Gossypium hirsutum... 0.02 Orthogroups_2024-Update
MA_93315g0010 No alias (p30164|act1_pea : 528.0) Actin-1 - Pisum sativum... 0.03 Orthogroups_2024-Update
Potri.001G309500 No alias actin 7 0.06 Orthogroups_2024-Update
Potri.016G045500 No alias actin-11 0.02 Orthogroups_2024-Update
Seita.7G294000.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Seita.8G043100.1 No alias actin filament protein 0.05 Orthogroups_2024-Update
Sobic.008G047000.1 No alias actin filament protein 0.04 Orthogroups_2024-Update
Sobic.009G153000.1 No alias actin filament protein 0.01 Orthogroups_2024-Update
Solyc04g011500 No alias actin 0.07 Orthogroups_2024-Update
Solyc10g080500 No alias actin 0.04 Orthogroups_2024-Update
Sopen03g021220 No alias Actin 0.03 Orthogroups_2024-Update
Sopen04g005680 No alias Actin 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004725 protein tyrosine phosphatase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 101 465
No external refs found!