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  5. Solyc03g082840

Solyc03g082840


Description : Dof zinc finger protein (AHRD V3.3 *** A0A068PXR9_TOBAC)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g082840
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
A4A49_13356 No alias cyclic dof factor 3 0.03 Orthogroups_2024-Update
A4A49_41416 No alias dof zinc finger protein dof1.4 0.04 Orthogroups_2024-Update
GRMZM2G045678 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Glyma.11G140200 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.11G151497 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G074140.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU2Hr1G119160.3 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
PSME_00004776-RA No alias (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... 0.02 Orthogroups_2024-Update
PSME_00056573-RA No alias (at5g62940 : 127.0) HCA2 induces the formation of... 0.02 Orthogroups_2024-Update
Potri.001G238400 No alias OBF-binding protein 3 0.04 Orthogroups_2024-Update
Potri.005G149100 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sopen02g035000 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen03g032010 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen06g001120 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen06g027770 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 33 89
No external refs found!