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  5. HORVU5Hr1G045620.1

HORVU5Hr1G045620.1


Description : component *(uS9) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0002098 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G045620.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
138369 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.14 Orthogroups_2024-Update
A4A49_19998 No alias 40s ribosomal protein s16 0.03 Orthogroups_2024-Update
A4A49_23464 No alias 40s ribosomal protein s16 0.04 Orthogroups_2024-Update
A4A49_46097 No alias 40s ribosomal protein s16 0.06 Orthogroups_2024-Update
Brara.A03778.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Brara.C00820.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Brara.C03046.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Brara.E03459.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Brara.J01727.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Cre13.g573351 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G353103 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.07 Orthogroups_2024-Update
GRMZM2G377797 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G427014 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.02G103600 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.05G241200 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.07 Orthogroups_2024-Update
Glyma.08G048200 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.09 Orthogroups_2024-Update
HORVU4Hr1G023530.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
HORVU4Hr1G023570.2 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Kfl00461_0050 kfl00461_0050_v1.1 (p46293|rs16_goshi : 254.0) 40S ribosomal protein S16 -... 0.04 Orthogroups_2024-Update
LOC_Os12g03090 No alias ribosomal protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g07720.1 No alias component RPS16 of SSU proteome 0.02 Orthogroups_2024-Update
Mp1g14290.1 No alias component RPS16 of SSU proteome 0.05 Orthogroups_2024-Update
Potri.001G304700 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.08 Orthogroups_2024-Update
Potri.008G150000 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.04 Orthogroups_2024-Update
Pp1s17_377V6 No alias 40s ribosomal protein s16 0.03 Orthogroups_2024-Update
Pp1s199_17V6 No alias 40s ribosomal protein s16 0.05 Orthogroups_2024-Update
Pp1s225_61V6 No alias 40s ribosomal protein s16 0.02 Orthogroups_2024-Update
Pp1s228_28V6 No alias 40s ribosomal protein s16 0.05 Orthogroups_2024-Update
Pp1s290_44V6 No alias 40s ribosomal protein s16 0.02 Orthogroups_2024-Update
Seita.7G306900.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Seita.8G007700.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sobic.005G019700.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.15 Orthogroups_2024-Update
Sobic.008G021100.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Solyc01g068530 No alias Ribosomal protein S16 (AHRD V3.3 *** A9P8S1_POPTR) 0.06 Orthogroups_2024-Update
Solyc04g026100 No alias Ribosomal protein S16 (AHRD V3.3 *** A9P8S1_POPTR) 0.05 Orthogroups_2024-Update
Solyc05g005690 No alias Ribosomal protein S9, putative (AHRD V3.3 *** B9RYF4_RICCO) 0.07 Orthogroups_2024-Update
Sopen01g030490 No alias Ribosomal protein S9/S16 0.07 Orthogroups_2024-Update
Sopen04g014030 No alias Ribosomal protein S9/S16 0.1 Orthogroups_2024-Update
Sopen05g001690 No alias Ribosomal protein S9/S16 0.02 Orthogroups_2024-Update
evm.model.contig_435.17 No alias (at2g09990 : 160.0) Ribosomal protein S5 domain 2-like... 0.14 Orthogroups_2024-Update
evm.model.tig00000123.14 No alias (at2g09990 : 175.0) Ribosomal protein S5 domain 2-like... 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004146 dihydrofolate reductase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Predicted GO
BP GO:0018199 peptidyl-glutamine modification IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046653 tetrahydrofolate metabolic process IEP Predicted GO
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 46 178
No external refs found!