At3g15170

Description : CUC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V703]

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g15170
Cluster	HCCA clusters: Cluster_188

Target	Alias	Description	ECC score	Gene Family Method
At1g32770	No alias	NAC domain-containing protein 12...	0.03	Orthogroups_2024-Update
At2g27300	No alias	NAC domain-containing protein 40...	0.05	Orthogroups_2024-Update
Bradi1g17440	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
Bradi3g13727	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Brara.A00921.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.A03481.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.A03785.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B00960.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C00996.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.F03613.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I00566.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.J01736.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.04G167200	No alias	NAC domain containing protein 100	0.04	Orthogroups_2024-Update
Glyma.07G050600	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.17G101500	No alias	NAC domain containing protein 100	0.04	Orthogroups_2024-Update
LOC_Os02g42970	No alias	NAC domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g42130	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_27968g0010	No alias	(at1g65910 : 231.0) NAC domain containing protein 28...	0.04	Orthogroups_2024-Update
PSME_00001380-RA	No alias	(at5g53950 : 248.0) Transcriptional activator of the NAC...	0.04	Orthogroups_2024-Update
PSME_00049694-RA	No alias	(at2g18060 : 259.0) Encodes a NAC-domain transcription...	0.04	Orthogroups_2024-Update
Potri.005G058900	No alias	NAC domain containing protein 82	0.03	Orthogroups_2024-Update
Pp1s279_85V6	No alias	no apical meristem	0.02	Orthogroups_2024-Update
Sopen03g034840	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	IEP	Predicted GO
CC	GO:0000775	chromosome, centromeric region	IEP	Predicted GO
MF	GO:0003682	chromatin binding	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0007049	cell cycle	IEP	Predicted GO
BP	GO:0009308	amine metabolic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predicted GO
MF	GO:0030410	nicotianamine synthase activity	IEP	Predicted GO
BP	GO:0030417	nicotianamine metabolic process	IEP	Predicted GO
BP	GO:0030418	nicotianamine biosynthetic process	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0072351	tricarboxylic acid biosynthetic process	IEP	Predicted GO
CC	GO:0098687	chromosomal region	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	21	147

External Links

No external refs found!

At3g15170

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation