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  5. HORVU5Hr1G054350.1

HORVU5Hr1G054350.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G054350.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
405704 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
442062 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
A4A49_12162 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
At2g42660 No alias At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0] 0.03 Orthogroups_2024-Update
Bradi1g63530 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00662.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E00699.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Brara.I00432.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.J01739.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Brara.J02547.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G701218 No alias myb-related protein 1 0.05 Orthogroups_2024-Update
Glyma.09G171100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G184700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G043000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os09g12770 No alias Myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
MA_120020g0010 No alias (at3g24120 : 209.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.001G133400 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G314800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G037200 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G001100 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Potri.017G054800 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Seita.1G069400.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.04 Orthogroups_2024-Update
Seita.2G436900.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Seita.6G158900.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Seita.9G419000.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G121600.1 No alias GARP subgroup PHL transcription factor & transcription... 0.04 Orthogroups_2024-Update
Sobic.002G422000.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G202300.2 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Sobic.007G137300.2 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Solyc06g051060 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.02 Orthogroups_2024-Update
Solyc08g076400 No alias Myb family transcription factor family protein (AHRD... 0.07 Orthogroups_2024-Update
Solyc11g011770 No alias Myb family transcription factor-like protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen05g034340 No alias MYB-CC type transfactor, LHEQLE motif 0.05 Orthogroups_2024-Update
Sopen06g016880 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen08g024980 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
BP GO:0016126 sterol biosynthetic process IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 38 88
IPR025756 Myb_CC_LHEQLE 130 175
No external refs found!