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  5. HORVU5Hr1G054640.1

HORVU5Hr1G054640.1


Description : ARF-type transcription factor


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G054640.1
Cluster HCAA Clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Brara.G01369.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G056120 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
GRMZM5G874163 No alias Transcriptional factor B3 family protein /... 0.02 Orthogroups_2024-Update
Mp1g07070.1 No alias transcription factor (ARF) 0.02 Orthogroups_2024-Update
Seita.7G169600.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Sopen02g022450 No alias Auxin response factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006480 N-terminal protein amino acid methylation IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!