HORVU5Hr1G056910.1


Description : mTERF-type transcription factor


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G056910.1
Cluster HCAA Clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
444400 No alias plastid transcriptionally active 15 0.03 Orthogroups_2024-Update
At1g62490 No alias Mitochondrial transcription termination factor family... 0.03 Orthogroups_2024-Update
At5g07900 No alias Mitochondrial transcription termination factor family... 0.03 Orthogroups_2024-Update
At5g64950 No alias Emb [Source:UniProtKB/TrEMBL;Acc:Q9LV83] 0.03 Orthogroups_2024-Update
Bradi1g16160 No alias Mitochondrial transcription termination factor family protein 0.03 Orthogroups_2024-Update
Bradi4g23227 No alias Mitochondrial transcription termination factor family protein 0.04 Orthogroups_2024-Update
Brara.A02580.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G024310.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G075340.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os06g12040 No alias mTERF family protein, expressed 0.02 Orthogroups_2024-Update
MA_205355g0010 No alias (at5g64950 : 101.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
MA_209070g0010 No alias (at5g64950 : 107.0) Mitochondrial transcription... 0.06 Orthogroups_2024-Update
MA_26585g0010 No alias (at5g64950 : 83.2) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00019792-RA No alias (at1g79220 : 99.0) Mitochondrial transcription... 0.04 Orthogroups_2024-Update
PSME_00020293-RA No alias (at5g23930 : 110.0) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
PSME_00023020-RA No alias (at1g79220 : 108.0) Mitochondrial transcription... 0.04 Orthogroups_2024-Update
PSME_00030142-RA No alias (at5g64950 : 89.4) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00049593-RA No alias (at5g64950 : 87.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00054530-RA No alias (at5g64950 : 91.3) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00056620-RA No alias (at1g79220 : 139.0) Mitochondrial transcription... 0.04 Orthogroups_2024-Update
Potri.003G190700 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
Pp1s219_66V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.1G321500.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Seita.4G092000.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Seita.4G094400.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Seita.4G095000.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G179800.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G396100.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc04g072490 No alias Epidermal patterning factor (AHRD V3.3 *** A0A072V8D7_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003690 MTERF 123 314
No external refs found!