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  5. At3g15370

At3g15370


Description : Expansin 12 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSN2]


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g15370
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
75237 No alias expansin A7 0.03 Orthogroups_2024-Update
A4A49_13869 No alias expansin-a3 0.03 Orthogroups_2024-Update
A4A49_64370 No alias expansin-a1 0.04 Orthogroups_2024-Update
At4g01630 No alias EXPA17 [Source:UniProtKB/TrEMBL;Acc:A0A178UWZ2] 0.03 Orthogroups_2024-Update
Brara.D02476.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Cre03.g153850 No alias expansin A2 0.02 Orthogroups_2024-Update
LOC_Os01g14650 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g06000 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g39990 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_4979g0010 No alias (q40636|expa2_orysa : 406.0) Expansin-A2 precursor... 0.04 Orthogroups_2024-Update
Mp2g18610.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
PSME_00006590-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00014026-RA No alias (at1g69530 : 221.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00051669-RA No alias (at2g40610 : 425.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Pp1s11_29V6 No alias expansin 2 0.03 Orthogroups_2024-Update
Pp1s191_40V6 No alias alpha expansin xpa5 0.03 Orthogroups_2024-Update
Pp1s223_38V6 No alias alpha expansin xpa5 0.02 Orthogroups_2024-Update
Pp1s246_53V6 No alias alpha-expansin 1 0.03 Orthogroups_2024-Update
Pp1s266_66V6 No alias alpha expansin xpa5 0.03 Orthogroups_2024-Update
Pp1s325_11V6 No alias expa6 gene for putative alpha expansin protein family EXPA6 0.03 Orthogroups_2024-Update
Pp1s75_138V6 No alias alpha-expansin 8 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 62 146
IPR007117 Expansin_CBD 157 235
No external refs found!