1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU5Hr1G058890.5

HORVU5Hr1G058890.5


Description : Unknown function


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G058890.5
Cluster HCAA Clusters: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
A4A49_21039 No alias f-box protein 0.04 Orthogroups_2024-Update
Glyma.07G247000 No alias F-box family protein 0.04 Orthogroups_2024-Update
Glyma.13G114400 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.001G318300 No alias F-box family protein 0.02 Orthogroups_2024-Update
Potri.006G013200 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.013G053301 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.014G162600 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Sopen09g001450 No alias F-box domain 0.02 Orthogroups_2024-Update
Sopen09g034550 No alias F-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 211 310
IPR001810 F-box_dom 24 61
No external refs found!