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  5. HORVU5Hr1G060530.1

HORVU5Hr1G060530.1


Description : Unknown function


Gene families : OG_42_0002207 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G060530.1
Cluster HCAA Clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
137689 No alias photosystem II reaction center protein C 0.02 Orthogroups_2024-Update
Bradi1g70724 No alias photosystem II reaction center protein C 0.02 Orthogroups_2024-Update
Bradi1g78082 No alias photosystem II reaction center protein C 0.02 Orthogroups_2024-Update
LOC_Os02g24632 No alias photosystem II 44 kDa reaction center protein, putative,... 0.02 Orthogroups_2024-Update
PSME_00001174-RA No alias (p41643|psbc_pinth : 422.0) Photosystem II 44 kDa... 0.05 Orthogroups_2024-Update
PSME_00003195-RA No alias (p41643|psbc_pinth : 452.0) Photosystem II 44 kDa... 0.05 Orthogroups_2024-Update
PSME_00003196-RA No alias (p41643|psbc_pinth : 96.7) Photosystem II 44 kDa... 0.05 Orthogroups_2024-Update
PSME_00038449-RA No alias (p41643|psbc_pinth : 132.0) Photosystem II 44 kDa... 0.05 Orthogroups_2024-Update
Solyc10g017940 No alias Photosystem II CP43 reaction center protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc10g047410 No alias Photosystem II CP43 reaction center protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen01g011530 No alias Photosystem II protein 0.05 Orthogroups_2024-Update
Sopen07g019860 No alias Photosystem II protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEA 16Dec
BP GO:0009767 photosynthetic electron transport chain IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0016168 chlorophyll binding IEA 16Dec
BP GO:0019684 photosynthesis, light reaction IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000932 PS_antenna-like 1 66
No external refs found!