Solyc03g082940


Description : Importin subunit beta-1 (AHRD V3.3 *** IMB1_ARATH)


Gene families : OG_42_0001757 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001757_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g082940
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G025600 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G013580.2 No alias nucleocytoplasmic import karyopherin *(IMB1) 0.04 Orthogroups_2024-Update
PSME_00036090-RA No alias (at5g53480 : 1155.0) ARM repeat superfamily protein;... 0.04 Orthogroups_2024-Update
Sobic.008G135200.1 No alias nucleocytoplasmic import karyopherin *(IMB1) 0.05 Orthogroups_2024-Update
evm.model.tig00021348.90 No alias (at5g53480 : 753.0) ARM repeat superfamily protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
MF GO:0008536 Ran GTPase binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 24 102
No external refs found!