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  5. HORVU5Hr1G065300.1

HORVU5Hr1G065300.1


Description : plant-specific E3 ubiquitin ligase *(RSL/RFA)


Gene families : OG_42_0000330 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G065300.1
Cluster HCAA Clusters: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
Brara.I04393.1 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) 0.03 Orthogroups_2024-Update
PSME_00024233-RA No alias (at3g53690 : 205.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 216 249
IPR002867 IBR_dom 301 350
No external refs found!