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  5. HORVU5Hr1G065950.1

HORVU5Hr1G065950.1


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G065950.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
84488 No alias cyclic nucleotide-gated cation channel 4 0.02 Orthogroups_2024-Update
A4A49_22015 No alias putative cyclic nucleotide-gated ion channel 15 0.02 Orthogroups_2024-Update
A4A49_30061 No alias putative cyclic nucleotide-gated ion channel 14 0.03 Orthogroups_2024-Update
At1g01340 No alias Probable cyclic nucleotide-gated ion channel 10... 0.03 Orthogroups_2024-Update
At1g19780 No alias Putative cyclic nucleotide-gated ion channel 8... 0.03 Orthogroups_2024-Update
At2g24610 No alias cyclic nucleotide-gated channel 14 [Source:TAIR;Acc:AT2G24610] 0.02 Orthogroups_2024-Update
At2g46450 No alias Probable cyclic nucleotide-gated ion channel 12... 0.05 Orthogroups_2024-Update
At4g01010 No alias Putative cyclic nucleotide-gated ion channel 13... 0.02 Orthogroups_2024-Update
At5g53130 No alias Cyclic nucleotide-gated ion channel 1... 0.05 Orthogroups_2024-Update
Bradi1g46260 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Bradi3g49290 No alias cyclic nucleotide-gated channel 15 0.03 Orthogroups_2024-Update
Brara.A02981.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Brara.B01426.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.B01472.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.C03656.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Brara.K00815.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
GRMZM2G074317 No alias Cyclic nucleotide-regulated ion channel family protein 0.04 Orthogroups_2024-Update
Glyma.03G257000 No alias cyclic nucleotide gated channel 1 0.04 Orthogroups_2024-Update
Glyma.06G126600 No alias cyclic nucleotide gated channel 1 0.02 Orthogroups_2024-Update
Glyma.06G271200 No alias cyclic nucleotide-gated cation channel 4 0.04 Orthogroups_2024-Update
Glyma.08G219300 No alias cyclic nucleotide gated channel 8 0.04 Orthogroups_2024-Update
Glyma.08G241600 No alias Cyclic nucleotide-regulated ion channel family protein 0.04 Orthogroups_2024-Update
Glyma.09G168500 No alias cyclic nucleotide-binding transporter 1 0.04 Orthogroups_2024-Update
Glyma.12G133700 No alias cyclic nucleotide-gated cation channel 4 0.03 Orthogroups_2024-Update
Glyma.16G025300 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Glyma.16G025400 No alias cyclic nucleotide-gated channel 13 0.02 Orthogroups_2024-Update
Glyma.16G218300 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Potri.002G170000 No alias cyclic nucleotide gated channel 10 0.04 Orthogroups_2024-Update
Potri.006G127300 No alias cyclic nucleotide-gated channel 6 0.02 Orthogroups_2024-Update
Potri.012G038700 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Potri.014G097900 No alias cyclic nucleotide gated channel 1 0.04 Orthogroups_2024-Update
Potri.015G019100 No alias cyclic nucleotide gated channel 1 0.02 Orthogroups_2024-Update
Potri.015G033900 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Seita.3G390700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Seita.4G168400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sobic.004G113300.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc05g050360 No alias cyclic nucleotide gated channel 1 (AHRD V3.3 *** AT5G53130.1) 0.03 Orthogroups_2024-Update
Solyc12g010010 No alias Cyclic nucleotide-gated ion channel, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen11g028290 No alias Ion transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 69 399
No external refs found!