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  5. HORVU5Hr1G066010.3

HORVU5Hr1G066010.3


Description : RNA editing factor *(OTP87)


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G066010.3
Cluster HCAA Clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Bradi1g00381 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g29450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 Orthogroups_2024-Update
Bradi4g38420 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G174500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G023470.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G006500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc04g082870 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004864 protein phosphatase inhibitor activity IEP Predicted GO
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
BP GO:0010923 negative regulation of phosphatase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019212 phosphatase inhibitor activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0031400 negative regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0035305 negative regulation of dephosphorylation IEP Predicted GO
BP GO:0035308 negative regulation of protein dephosphorylation IEP Predicted GO
BP GO:0043086 negative regulation of catalytic activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0044092 negative regulation of molecular function IEP Predicted GO
BP GO:0045936 negative regulation of phosphate metabolic process IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051346 negative regulation of hydrolase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 160 206
IPR002885 Pentatricopeptide_repeat 359 405
IPR002885 Pentatricopeptide_repeat 559 605
IPR002885 Pentatricopeptide_repeat 60 106
IPR002885 Pentatricopeptide_repeat 534 556
IPR002885 Pentatricopeptide_repeat 461 491
IPR002885 Pentatricopeptide_repeat 634 659
IPR002885 Pentatricopeptide_repeat 335 358
No external refs found!