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  5. HORVU5Hr1G068810.2

HORVU5Hr1G068810.2


Description : component *(Sec23) of Sec23/24 cargo adaptor subcomplex


Gene families : OG_42_0001214 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G068810.2
Cluster HCAA Clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
At3g23660 No alias Sec23/Sec24 protein transport family protein... 0.03 Orthogroups_2024-Update
Bradi3g38100 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
Cre03.g180850 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
Glyma.11G253500 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
Glyma.18G003500 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
Mp2g15530.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Orthogroups_2024-Update
Potri.014G178500 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA 16Dec
BP GO:0006888 ER to Golgi vesicle-mediated transport IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
CC GO:0030127 COPII vesicle coat IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006895 Znf_Sec23_Sec24 54 92
IPR006900 Sec23/24_helical_dom 520 617
IPR007123 Gelsolin-like_dom 634 720
IPR012990 Sec23_24_beta_S 401 506
IPR006896 Sec23/24_trunk_dom 123 390
No external refs found!