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  5. HORVU5Hr1G069030.6

HORVU5Hr1G069030.6


Description : group-II intron mitochondrial splicing factor *(MISF68)


Gene families : OG_42_0008876 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008876_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G069030.6
Cluster HCAA Clusters: Cluster_242


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 582 628
IPR002885 Pentatricopeptide_repeat 512 561
IPR002885 Pentatricopeptide_repeat 195 245
IPR002885 Pentatricopeptide_repeat 371 421
IPR002885 Pentatricopeptide_repeat 333 365
IPR002885 Pentatricopeptide_repeat 299 330
IPR002885 Pentatricopeptide_repeat 481 510
IPR002885 Pentatricopeptide_repeat 127 155
IPR002885 Pentatricopeptide_repeat 446 473
IPR002885 Pentatricopeptide_repeat 270 296
No external refs found!